Transcript
      Expression
      Mutation
      Predicted ORFs
      Variation
      References

ZF_LNC002267

Transcript Name: tie-1AS
Alias: tie1-as
Type: Anti-sense
Genomic Location: chr6:33681514-33682310
Nearest Gene: tie-1 ( NR_036574)


tie-1AS
Exons
3368151433682310



Expression Information

Information not available





Mutant Information


ChromosomeMutant PositionZFIN ID

No retroviral insertion mapping detected




Predicted Open Reading Frames


ORFRangeSequence
1. 79-132 MSKLTANLNFMSRTDDFQ
2. 122-196 MTFSKDNASFSQVLHLIILAPLSIV
3. 245-286 MSMQSPHRPDALQW
4. 283-315 MVAYIVGSISS
5. 273-482 MRYNGSLYRRFHFLLSNPRSTCPEISILPESEVSFHSLFSIAMWPWWSVSLSDDGTWPQGSDSNAEPYCD
6. 430-525 MMEPGHREVTVTQSPTAISLPWAMTPSWVWGG
7. 702-776 MRNIEKLSNIRKSIRFQVFFFQNSF

Variant Information


Variant PositionrsIDReferenceAlternate
33681519 rs179462582 A G
33681523 rs179462443 A G
33681706 rs179462481 C T
33682042 rs40846834 A G

References

lncRNA has been predicted by:

Li K, Blum Y, Verma A, Liu Z, Pramanik K, Leigh NR, Chun CZ, Samant GV, Zhao B, Garnaas MK, Horswill MA, Stanhope SA, North PE, Miao RQ, Wilkinson GA, Affolter M, Ramchandran R
A noncoding antisense RNA in tie-1 locus regulates tie-1 function in vivo
Blood(2010) 115(1)
PMID: 19880500

Expression information has been derived from:

Retroviral insertion lines mapping to lncRNA loci has been derived from: