Transcript
      Expression
      Mutation
      Predicted ORFs
      Variation
      References

ZF_LNC001666

Transcript Name: lnc2_zgc:165515
Type: lincRNA
Genomic Location: chr4:59172960-59173202
Nearest Gene: zgc:165515 (NM_001099227)


lnc2_zgc:165515
Exons
5917296059173202



Expression Information

log10FPKM values for lncRNA in different stages
  2-4 cell 1-K cell Dome Shield Bud 1 dpf 2 dpf 3 dpf 5 dpf Adult Heart Blood Brain Kidney Liver
log10FPKM values 1.39 0 1.95 2.32 2.28 1.1 1.76 1.35 1.96 2.03 2.45 2.66 2.18 2.19 0



Mutant Information


ChromosomeMutant PositionZFIN ID

No retroviral insertion mapping detected




Predicted Open Reading Frames


ORFRangeSequence
1. 156-230 MHLAHTPVYFDLALHSLHAPVLTFA

Variant Information


Variant PositionrsIDReferenceAlternate

No variation reported in dbSNP within this genomic loci


References

lncRNA has been predicted by:

Kaushik K, Leonard VE, Kv S, Lalwani MK, Jalali S, Patowary A, Joshi A, Scaria V, Sivasubbu S
Dynamic expression of long non-coding RNAs (lncRNAs) in adult zebrafish.
Plos One(2013) 8(12):e83616
PMID: 24391796

Expression information has been derived from:

Retroviral insertion lines mapping to lncRNA loci has been derived from: