Transcript
      Expression
      Mutation
      Predicted ORFs
      Variation
      References

ZF_LNC001662

Transcript Name: lnc_si:ch211-238e22.2
Type: lincRNA
Genomic Location: chr4:57625527-57980569
Nearest Gene: si:ch211-238e22.2 (NM_001030146)


lnc_si:ch211-238e22.2
Exons
5762552757980569




Expression Information

log10FPKM values for lncRNA in different stages
  2-4 cell 1-K cell Dome Shield Bud 1 dpf 2 dpf 3 dpf 5 dpf Adult Heart Blood Brain Kidney Liver
log10FPKM values 0.03 -1.12 1.11 0.51 0.19 0.03 0.08 -0.48 0.23 -0.54 -0.17 0.06 -0.51 -0.11 0.41



Mutant Information


ChromosomeMutant PositionZFIN ID

No retroviral insertion mapping detected




Predicted Open Reading Frames


ORFRangeSequence

Variant Information


Variant PositionrsIDReferenceAlternate

No variation reported in dbSNP within the exonic region of the transcript



References

lncRNA has been predicted by:

Pauli A, Valen E, Lin MF, Garber M, Vastenhouw NL, Levin JZ, Fan L, Sandelin A, Rinn JL, Regev A, Schier AF
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis.
Genome Research (2012) 22:577-591
PMID: 22110045

Expression information has been derived from:

Retroviral insertion lines mapping to lncRNA loci has been derived from: