Transcript
      Expression
      Mutation
      Predicted ORFs
      Variation
      References

ZF_LNC001610

Transcript Name: mstx114
Type: lincRNA
Genomic Location: chr4:14506599-14507023
Nearest Gene: plxna4 (NM_001004495)


mstx114
Exons
1450659914507023



Expression Information

log10FPKM values for lncRNA in different stages
  2-4 cell 1-K cell Dome Shield Bud 1 dpf 2 dpf 3 dpf 5 dpf Adult Heart Blood Brain Kidney Liver
log10FPKM values 0 0 0 0 0.32 0.93 1.66 1.48 2.02 0 0 1.59 2.2 0.85 0



Mutant Information


ChromosomeMutant PositionZFIN ID

No retroviral insertion mapping detected




Predicted Open Reading Frames


ORFRangeSequence
1. 52-114 MMGTFTGIPTLLLHKYSQTPF
2. 271-303 MTRWLSEFKAR

Variant Information


Variant PositionrsIDReferenceAlternate
14506746 rs180035893 G C

References

lncRNA has been predicted by:

Kaushik K, Leonard VE, Kv S, Lalwani MK, Jalali S, Patowary A, Joshi A, Scaria V, Sivasubbu S
Dynamic expression of long non-coding RNAs (lncRNAs) in adult zebrafish.
Plos One(2013) 8(12):e83616
PMID: 24391796

Expression information has been derived from:

Retroviral insertion lines mapping to lncRNA loci has been derived from: