Transcript
      Expression
      Mutation
      Predicted ORFs
      Variation
      References

ZF_LNC001604

Transcript Name: lnc_prickle1b
Type: lincRNA
Genomic Location: chr4:13060103-13060307
Nearest Gene: prickle1b (NM_001030098)


lnc_prickle1b
Exons
1306010313060307



Expression Information

log10FPKM values for lncRNA in different stages
  2-4 cell 1-K cell Dome Shield Bud 1 dpf 2 dpf 3 dpf 5 dpf Adult Heart Blood Brain Kidney Liver
log10FPKM values 1.72 0 2.13 0 2.35 2.19 2.31 2.32 2.84 0 2.65 2.05 2.31 1.68 0



Mutant Information


ChromosomeMutant PositionZFIN ID

No retroviral insertion mapping detected




Predicted Open Reading Frames


ORFRangeSequence
1. 143-193 MGQHSGDAESQFESQLR

Variant Information


Variant PositionrsIDReferenceAlternate

No variation reported in dbSNP within this genomic loci


References

lncRNA has been predicted by:

Kaushik K, Leonard VE, Kv S, Lalwani MK, Jalali S, Patowary A, Joshi A, Scaria V, Sivasubbu S
Dynamic expression of long non-coding RNAs (lncRNAs) in adult zebrafish.
Plos One(2013) 8(12):e83616
PMID: 24391796

Expression information has been derived from:

Retroviral insertion lines mapping to lncRNA loci has been derived from: