Transcript
      Expression
      Mutation
      Predicted ORFs
      Variation
      References

ZF_LNC001564

Transcript Name: lnc_pik3cg
Type: lincRNA
Genomic Location: chr4:3265237-3275995
Nearest Gene: pik3cg (NM_213306)


lnc_pik3cg
Exons
32652373275995



Expression Information

log10FPKM values for lncRNA in different stages
  2-4 cell 1-K cell Dome Shield Bud 1 dpf 2 dpf 3 dpf 5 dpf Adult Heart Blood Brain Kidney Liver
log10FPKM values 0.13 0.41 0.1 -0.09 0.39 1.03 1.9 1.4 1.61 1.58 1.58 1.23 1.55 1.16 0.97



Mutant Information


ChromosomeMutant PositionZFIN ID

No retroviral insertion mapping detected




Predicted Open Reading Frames


ORFRangeSequence

Variant Information


Variant PositionrsIDReferenceAlternate
3271847 rs180034986 A T

References

lncRNA has been predicted by:

Kaushik K, Leonard VE, Kv S, Lalwani MK, Jalali S, Patowary A, Joshi A, Scaria V, Sivasubbu S
Dynamic expression of long non-coding RNAs (lncRNAs) in adult zebrafish.
Plos One(2013) 8(12):e83616
PMID: 24391796

Expression information has been derived from:

Retroviral insertion lines mapping to lncRNA loci has been derived from: