Transcript
      Expression
      Mutation
      Predicted ORFs
      Variation
      References

ZF_LNC001532

Transcript Name: dnm2aia1
Type: Intronic
Genomic Location: chr3:48382957-48385180
Nearest Gene: dnm2a (NM_001030128)


dnm2aia1
Exons
4838295748385180




Expression Information

Negligible Expression across RNA-Seq datasets





Mutant Information


ChromosomeMutant PositionZFIN ID

No retroviral insertion mapping detected




Predicted Open Reading Frames


ORFRangeSequence
1. 166-207 MAERGKCDCKWLRT
2. 207-287 MKKGAMMAERSVIPLEGGLGYGFATQQ
3. 291-338 MCEYPESMFEIKIINH
4. 268-345 MDLPRSSECVSILKVCLKLKSLIIKE
5. 409-495 MYGQIYVFYSLFAFITSYETRFKCKNRRR
6. 413-553 MGRSMFFILCLHSSLRMRHVLNVKIEDVNLNELHFISIGVNLCFNLN
7. 693-797 MFTTLLKWDYDFGNCKIKIQPYWLHHLYALQNLFN
8. 775-804 MLCKTFLIKC
9. 914-997 MMFLVSFGYIWTKNFFIFLIEFSVKYLF
10. 1139-1180 MYNSNIYSFTTFSV
11. 1768-1800 MLQLNSSPHIG
12. 1921-1998 MNHIAEFTMWSLHGVNFTPNRVCMRC
13. 2044-2073 MFALLYLSIS
14. 2095-2139 MQIFSSTKLIQINVK
15. 2186-2221 MKLCLYSNKLNV

Variant Information


Variant PositionrsIDReferenceAlternate

No variation reported in dbSNP within this genomic loci


References

lncRNA has been predicted by:

Pauli A, Valen E, Lin MF, Garber M, Vastenhouw NL, Levin JZ, Fan L, Sandelin A, Rinn JL, Regev A, Schier AF
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis.
Genome Research (2012) 22:577-591
PMID: 22110045

Expression information has been derived from:

Retroviral insertion lines mapping to lncRNA loci has been derived from: