Transcript
      Expression
      Mutation
      Predicted ORFs
      Variation
      References

ZF_LNC001215

Transcript Name: tnnc1aia3
Type: Intronic
Genomic Location: chr23:4635206-4652545
Nearest Gene: tnnc1a (NM_181498)


tnnc1aia3
Exons
46352064652545





Expression Information

log10FPKM values for lncRNA in different stages
  2-4 cell 1-K cell Dome Shield Bud 1 dpf 2 dpf 3 dpf 5 dpf Adult Heart Blood Brain Kidney Liver
log10FPKM values 0.11 -0.26 -1.06 -0.46 -0.35 -0.87 0.3 0.58 0.59 0.69 -0.1 0 1.39 0.16 0.16



Mutant Information


ChromosomeMutant PositionZFIN ID

No retroviral insertion mapping detected




Predicted Open Reading Frames


ORFRangeSequence

Variant Information


Variant PositionrsIDReferenceAlternate

No variation reported in dbSNP within the exonic region of the transcript



References

lncRNA has been predicted by:

Ulitsky I, Shkumatava A, Jan CH, Sive H, Bartel DP
Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution.
Cell(2011) 147: 1537-1550
PMID:22196729

Expression information has been derived from:

Retroviral insertion lines mapping to lncRNA loci has been derived from: