Transcript
      Expression
      Mutation
      Predicted ORFs
      Variation
      References

ZF_LNC000494

Transcript Name: cldnjia
Type: Intronic
Genomic Location: chr15:2610651-2615905
Nearest Gene: cldnj (NM_131769)


cldnjia
Exons
26106512615905



Expression Information

Negligible Expression across RNA-Seq datasets





Mutant Information


ChromosomeMutant PositionZFIN ID

No retroviral insertion mapping detected




Predicted Open Reading Frames


ORFRangeSequence

Variant Information


Variant PositionrsIDReferenceAlternate
2611614 rs180106045 T G
2613479 rs180106044 T G
2614738 rs179645305 T C
2614755 rs179645349 G T
2614760 rs179645296 T A
2614956 rs179645297 C G
2615047 rs179645341 T C
2615129 rs179645319 T C
2615140 rs179645312 T C
2615176 rs179645350 A C
2615181 rs179645291 T C
2615186 rs179645355 T A
2615577 rs179645282 A G
2615580 rs179645316 T A
2615585 rs179645311 AG A
2615598 rs179645322 C T
2615603 rs179645328 A C
2615611 rs179645277 G A
2615820 rs180106043 C T

References

lncRNA has been predicted by:

Ulitsky I, Shkumatava A, Jan CH, Sive H, Bartel DP
Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution.
Cell(2011) 147: 1537-1550
PMID:22196729

Expression information has been derived from:

Retroviral insertion lines mapping to lncRNA loci has been derived from: