Transcript
      Expression
      Mutation
      Predicted ORFs
      Variation
      References

ZF_LNC000319

Transcript Name: ebf3ia
Type: Intronic
Genomic Location: chr12:44254847-44257953
Nearest Gene: ebf3 (NM_001080602)


ebf3ia
Exons
4425484744257953




Expression Information

log10FPKM values for lncRNA in different stages
  2-4 cell 1-K cell Dome Shield Bud 1 dpf 2 dpf 3 dpf 5 dpf Adult Heart Blood Brain Kidney Liver
log10FPKM values 0.15 0 0 0 -0.55 0.79 1.6 0.71 1.64 0 0 0 0 0.15 0



Mutant Information


ChromosomeMutant PositionZFIN ID

No retroviral insertion mapping detected




Predicted Open Reading Frames


ORFRangeSequence

Variant Information


Variant PositionrsIDReferenceAlternate
44257145 rs40904126 A G

References

lncRNA has been predicted by:

Pauli A, Valen E, Lin MF, Garber M, Vastenhouw NL, Levin JZ, Fan L, Sandelin A, Rinn JL, Regev A, Schier AF
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis.
Genome Research (2012) 22:577-591
PMID: 22110045

Expression information has been derived from:

Retroviral insertion lines mapping to lncRNA loci has been derived from: