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Transcript IDChromosomeStartStopStrandClassNearest GeneNMIDDistanceGene LengthAuthor
ZF_LNC001431 chr3 1609347 1609631 + lincRNA dicp1.17 NM_001258236 -145618 284 Kaushik et. al. [PMID:24391796]
ZF_LNC001432* chr3 1906044 1919692 - Promoter srebf2 NM_001089466 2012 4457 Ulitsky et. al. [PMID:22196729]
ZF_LNC001433 chr3 2344066 2476421 + lincRNA sox10 NM_131875 75214 259 Kaushik et. al. [PMID:24391796]
ZF_LNC001434 chr3 3532157 3896406 + lincRNA zgc:171446 NM_001114556 39016 292 Kaushik et. al. [PMID:24391796]
ZF_LNC001435 chr3 3532891 3696562 + lincRNA zgc:171446 NM_001114556 238860 599 Pauli et. al. [PMID:22110045]
ZF_LNC001436 chr3 3658172 3873435 + lincRNA zgc:171446 NM_001114556 61987 1046 Pauli et. al. [PMID:22110045]
ZF_LNC001437 chr3 3870066 3873435 + lincRNA zgc:171446 NM_001114556 61987 1103 Pauli et. al. [PMID:22110045]
ZF_LNC001438 chr3 4105305 4106310 + lincRNA pick1 NM_001077336 37308 212 Pauli et. al. [PMID:22110045]
ZF_LNC001439 chr3 4232992 4233393 + lincRNA plbd1 NM_001130791 -28793 401 Kaushik et. al. [PMID:24391796]
ZF_LNC001440 chr3 6223964 6224384 + lincRNA ddx39b NM_212977 -62299 420 Kaushik et. al. [PMID:24391796]
ZF_LNC001441 chr3 8882547 8883350 + lincRNA zgc:113250 NM_001014360 -12632 353 Pauli et. al. [PMID:22110045]
ZF_LNC001442 chr3 9145324 9146709 + lincRNA sim2 NM_131836 -51182 669 Kaushik et. al. [PMID:24391796]
ZF_LNC001443 chr3 10368558 10398004 - lincRNA rnps1 NM_199761 124652 844 Ulitsky et. al. [PMID:22196729]
ZF_LNC001444 chr3 13103007 13103255 + lincRNA dhps NM_213222 123717 248 Kaushik et. al. [PMID:24391796]
ZF_LNC001445 chr3 13106979 13109492 + lincRNA dhps NM_213222 117480 2513 Ulitsky et. al. [PMID:22196729]
ZF_LNC001446 chr3 13192451 13208590 + lincRNA dhps NM_213222 18382 4910 Ulitsky et. al. [PMID:22196729]
ZF_LNC001447 chr3 13304958 13320819 - lincRNA dhps NM_213222 64632 5441 Ulitsky et. al. [PMID:22196729]
ZF_LNC001448 chr3 13611301 13611542 + lincRNA elof1 NM_200386 -3198 241 Kaushik et. al. [PMID:24391796]
ZF_LNC001449* chr3 13949156 13981088 + lincRNA nfil3-6 NM_001002218 -53558 7056 Ulitsky et. al. [PMID:22196729]
ZF_LNC001450 chr3 14876539 14876887 + lincRNA cabp5b NM_001020732 24532 260 Kaushik et. al. [PMID:24391796]
ZF_LNC001451* chr3 15109777 15110749 + Overlapping nupr1 NM_001281922 _ 802 Ulitsky et. al. [PMID:22196729]
ZF_LNC001452 chr3 15224913 15225395 + lincRNA zgc:66474 NM_199815 25390 482 Kaushik et. al. [PMID:24391796]
ZF_LNC001453* chr3 15231862 15240102 - lincRNA zgc:66474 NM_199815 -10683 3513 Ulitsky et. al. [PMID:22196729]
ZF_LNC001454 chr3 15595052 15611175 + Overlapping nme3 NM_130928 _ 733 Pauli et. al. [PMID:22110045]
ZF_LNC001455 chr3 15674989 15675713 + Overlapping atp6v0ca NM_001105136 _ 648 Pauli et. al. [PMID:22110045]
ZF_LNC001456 chr3 15684861 15688210 - lincRNA lasp1 NM_212636 -4742 646 Ulitsky et. al. [PMID:22196729]
ZF_LNC001457* chr3 15860898 15870530 - lincRNA rpl19 NM_213208 8477 1563 Ulitsky et. al. [PMID:22196729]
ZF_LNC001458 chr3 17170541 17171488 + lincRNA hcrt NM_001077392 9730 947 Kaushik et. al. [PMID:24391796]
ZF_LNC001459 chr3 18593417 18609870 + Overlapping hagh NM_200043 _ 310 Pauli et. al. [PMID:22110045]
ZF_LNC001460 chr3 19029131 19038621 + Overlapping rln3a NM_001037803 _ 197 Pauli et. al. [PMID:22110045]
ZF_LNC001461 chr3 19324699 19324934 + lincRNA zgc:112320 NM_001159826 49394 235 Kaushik et. al. [PMID:24391796]
ZF_LNC001462 chr3 19700482 19702044 + lincRNA rnd2 NM_001045364 36117 329 Pauli et. al. [PMID:22110045]
ZF_LNC001463 chr3 19948962 19953286 + Overlapping ubtf NM_001005395 _ 4324 Ulitsky et. al. [PMID:22196729]
ZF_LNC001464 chr3 19948962 19953414 + Overlapping ubtf NM_001005395 _ 4452 Ulitsky et. al. [PMID:22196729]
ZF_LNC001465 chr3 20126611 20126929 + lincRNA sepw2a NM_194417 -118983 318 Kaushik et. al. [PMID:24391796]
ZF_LNC001466 chr3 23511510 23520283 + Overlapping col1a1a NM_199214 _ 1417 Pauli et. al. [PMID:22110045]
ZF_LNC001467 chr3 23511510 23520283 + Overlapping col1a1a NM_199214 _ 1543 Pauli et. al. [PMID:22110045]
ZF_LNC001468 chr3 23516087 23529550 + Overlapping col1a1a NM_199214 _ 1154 Pauli et. al. [PMID:22110045]
ZF_LNC001469 chr3 23977441 23979528 - Overlapping hoxb8a NM_131120 _ 2087 Ulitsky et. al. [PMID:22196729]
ZF_LNC001470 chr3 23977441 23978791 - Promoter hoxb8a NM_131120 -358 1350 Ulitsky et. al. [PMID:22196729]
ZF_LNC001472 chr3 24031591 24035520 - Intronic hoxb3a NM_131117 _ 3929 Ulitsky et. al. [PMID:22196729]
ZF_LNC001471 chr3 24031591 24033372 - Intronic hoxb3a NM_131117 _ 1781 Ulitsky et. al. [PMID:22196729]
ZF_LNC001473 chr3 24041401 24043513 - Overlapping hoxb2a NM_131116 _ 2112 Ulitsky et. al. [PMID:22196729]
ZF_LNC001474* chr3 24425686 24436491 + lincRNA copz2 NM_131507 -23032 2887 Ulitsky et. al. [PMID:22196729]
ZF_LNC001475 chr3 24456159 24462312 + lincRNA prr15la NM_001003478 19135 363 Pauli et. al. [PMID:22110045]
ZF_LNC001476 chr3 24729856 24742681 + lincRNA pvalb6 NM_205573 -3707 804 Pauli et. al. [PMID:22110045]
ZF_LNC001477 chr3 24930217 24930541 + Promoter zgc:113411 NM_001017912 2189 324 Kaushik et. al. [PMID:24391796]
ZF_LNC001478 chr3 25157242 25161387 + Overlapping xpnpep3 NM_207079 _ 380 Pauli et. al. [PMID:22110045]
ZF_LNC001479 chr3 25233286 25236376 + Overlapping zgc:63831 NM_200031 _ 319 Pauli et. al. [PMID:22110045]
ZF_LNC001480 chr3 25641791 25642046 + lincRNA grb2b NM_213035 -49553 255 Kaushik et. al. [PMID:24391796]
ZF_LNC001481 chr3 25674044 25674800 + lincRNA grb2b NM_213035 -81806 619 Pauli et. al. [PMID:22110045]
ZF_LNC001482* chr3 26674223 26675062 - Promoter zgc:153240 NM_001045389 -821 839 Ulitsky et. al. [PMID:22196729]
ZF_LNC001483 chr3 27046774 27050353 + Promoter gcat NM_001172554 -1726 2288 Ulitsky et. al. [PMID:22196729]
ZF_LNC001484 chr3 27068505 27083700 + lincRNA gcat NM_001172554 -23457 5071 Ulitsky et. al. [PMID:22196729]
ZF_LNC001485 chr3 28801066 28884823 + Overlapping gsg1l NM_001039976 _ 944 Pauli et. al. [PMID:22110045]
ZF_LNC001486 chr3 28801066 28884823 + Overlapping gsg1l NM_001039976 _ 947 Pauli et. al. [PMID:22110045]
ZF_LNC001487 chr3 28850216 28883714 + Overlapping gsg1l NM_001039976 _ 564 Pauli et. al. [PMID:22110045]
ZF_LNC001488 chr3 28850277 28884884 + Overlapping gsg1l NM_001039976 _ 840 Pauli et. al. [PMID:22110045]
ZF_LNC001489 chr3 28850277 28884884 + Overlapping gsg1l NM_001039976 _ 949 Pauli et. al. [PMID:22110045]
ZF_LNC001490 chr3 29864329 29868264 + Overlapping cacng2a NM_200641 _ 1236 Pauli et. al. [PMID:22110045]
ZF_LNC001492 chr3 29986389 30014699 + Overlapping cacng2a NM_200641 _ 1133 Pauli et. al. [PMID:22110045]
ZF_LNC001491 chr3 29986389 30014699 + Overlapping cacng2a NM_200641 _ 1080 Pauli et. al. [PMID:22110045]
ZF_LNC001493 chr3 30080700 30081006 + Overlapping grna NM_001001949 _ 216 Pauli et. al. [PMID:22110045]
ZF_LNC001494 chr3 30173196 30174321 + lincRNA hsd17b14 NM_001003521 -44621 881 Pauli et. al. [PMID:22110045]
ZF_LNC001495 chr3 30399862 30400150 + Promoter emc10 NM_001102389 -452 288 Kaushik et. al. [PMID:24391796]
ZF_LNC001496 chr3 30845519 30846926 + lincRNA suv420h2 NM_001098186 177276 933 Pauli et. al. [PMID:22110045]
ZF_LNC001497 chr3 30845520 30846328 + lincRNA suv420h2 NM_001098186 177874 549 Pauli et. al. [PMID:22110045]
ZF_LNC001498 chr3 31211694 31219792 - lincRNA tceb2 NM_001142954 -594 8098 Ulitsky et. al. [PMID:22196729]
ZF_LNC001499 chr3 31244330 31244883 - lincRNA zgc:153292 NM_001076669 6483 553 Ulitsky et. al. [PMID:22196729]
ZF_LNC001501 chr3 31249245 31255614 + lincRNA arl6ip1 NM_201112 395 2366 Ulitsky et. al. [PMID:22196729]
ZF_LNC001500 chr3 31249245 31256772 + Overlapping arl6ip1 NM_201112 _ 3524 Ulitsky et. al. [PMID:22196729]
ZF_LNC001502 chr3 31340971 31341206 + lincRNA smg1 NM_001080044 -31414 235 Kaushik et. al. [PMID:24391796]
ZF_LNC001504 chr3 32462109 32471318 - lincRNA prl NM_181437 -7574 568 Ulitsky et. al. [PMID:22196729]
ZF_LNC001503* chr3 32462109 32474666 - Promoter prl NM_181437 -4226 649 Ulitsky et. al. [PMID:22196729]
ZF_LNC001505 chr3 32707380 32709028 + lincRNA tspan4b NM_001082807 14957 1363 Pauli et. al. [PMID:22110045]
ZF_LNC001507 chr3 32798741 32800719 + lincRNA thoc6 NM_001006095 -3334 926 Ulitsky et. al. [PMID:22196729]
ZF_LNC001506 chr3 32798741 32800638 + lincRNA thoc6 NM_001006095 -3334 845 Ulitsky et. al. [PMID:22196729]
ZF_LNC001509 chr3 32992136 32996323 - Promoter zgc:162613 NM_001110453 -3388 4187 Ulitsky et. al. [PMID:22196729]
ZF_LNC001508 chr3 32992136 32996217 - Promoter zgc:162613 NM_001110453 -3494 1141 Ulitsky et. al. [PMID:22196729]
ZF_LNC001510 chr3 34225658 34232390 + Overlapping si:dkey-204f11.64 NM_001288641 _ 3191 Ulitsky et. al. [PMID:22196729]
ZF_LNC001511 chr3 35005011 35066751 + Promoter smarce1 NM_201298 4478 250 Kaushik et. al. [PMID:24391796]
ZF_LNC001512* chr3 36765128 36766960 - Overlapping si:ch1073-443f11.2 NM_001271773 _ 1098 Ulitsky et. al. [PMID:22196729]
ZF_LNC001513 chr3 36890213 36919057 + lincRNA ezh1 NM_001039983 -3918 588 Pauli et. al. [PMID:22110045]
ZF_LNC001514 chr3 37470570 37472215 + lincRNA arf2 NM_201504 81057 1645 Ulitsky et. al. [PMID:22196729]
ZF_LNC001515 chr3 37629355 37644171 + Promoter gosr2 NM_199688 167 1489 Pauli et. al. [PMID:22110045]
ZF_LNC001516 chr3 37629467 37634640 + lincRNA gosr2 NM_199688 9698 1372 Pauli et. al. [PMID:22110045]
ZF_LNC001517 chr3 39253591 39258782 + Overlapping nmt1a NM_001020480 _ 848 Pauli et. al. [PMID:22110045]
ZF_LNC001518 chr3 39254282 39259299 + Overlapping nmt1a NM_001020480 _ 812 Pauli et. al. [PMID:22110045]
ZF_LNC001519* chr3 39254584 39259144 + Overlapping plcd3a NM_001099423 _ 473 Pauli et. al. [PMID:22110045]
ZF_LNC001520 chr3 39254633 39259299 + Overlapping plcd3a NM_001099423 _ 617 Pauli et. al. [PMID:22110045]
ZF_LNC001521 chr3 39622242 39626858 + Overlapping grapa NM_001020573 _ 651 Pauli et. al. [PMID:22110045]
ZF_LNC001522 chr3 40391457 40400031 - lincRNA slc29a4 NM_001080572 46939 8494 Ulitsky et. al. [PMID:22196729]
ZF_LNC001523 chr3 42179276 42186174 - lincRNA nudt1 NM_213418 58838 875 Ulitsky et. al. [PMID:22196729]
ZF_LNC001524 chr3 42179276 42186203 - lincRNA nudt1 NM_213418 58838 904 Ulitsky et. al. [PMID:22196729]
ZF_LNC001525 chr3 42956131 42959881 - Overlapping axin1 NM_131503 _ 3750 Ulitsky et. al. [PMID:22196729]
ZF_LNC001526 chr3 43798401 43862748 + lincRNA psmg3 NM_001002529 -101807 475 Kaushik et. al. [PMID:24391796]
ZF_LNC001527 chr3 44215397 44215790 + lincRNA rab11fip4a NM_001002533 58140 393 Kaushik et. al. [PMID:24391796]
ZF_LNC001528 chr3 44573573 44574041 + lincRNA hs3st4 NM_001080589 5393 468 Kaushik et. al. [PMID:24391796]
ZF_LNC001529 chr3 45321508 45322139 + Promoter pdpk1a NM_001077344 2064 631 Kaushik et. al. [PMID:24391796]
ZF_LNC001530 chr3 48293410 48293772 + lincRNA qtrt1 NM_201010 8773 362 Kaushik et. al. [PMID:24391796]
ZF_LNC001531 chr3 48318251 48319331 - Overlapping dnm2a NM_001030128 _ 1080 Ulitsky et. al. [PMID:22196729]
ZF_LNC001532 chr3 48382957 48385180 + Intronic dnm2a NM_001030128 _ 838 Pauli et. al. [PMID:22110045]
ZF_LNC001533 chr3 48583754 48588133 + lincRNA zgc:158309 NM_001079978 -8152 2676 Pauli et. al. [PMID:22110045]
ZF_LNC001534 chr3 49621936 49633923 - Overlapping metrnl NM_212985 _ 1102 Ulitsky et. al. [PMID:22196729]
ZF_LNC001535 chr3 50808018 50837905 + lincRNA asf1ba NM_207063 -8151 4980 Ulitsky et. al. [PMID:22196729]
ZF_LNC001536 chr3 53270958 53271325 + lincRNA zgc:113210 NM_001013514 13840 367 Kaushik et. al. [PMID:24391796]
ZF_LNC001537 chr3 53444293 53447732 + lincRNA atp13a NM_001001403 90090 226 Pauli et. al. [PMID:22110045]
ZF_LNC001538 chr3 55651523 55651776 + lincRNA ubald1b NM_001020671 35294 253 Kaushik et. al. [PMID:24391796]
ZF_LNC001539 chr3 56069083 56069667 + lincRNA hbae3 NM_183066 -69679 584 Kaushik et. al. [PMID:24391796]
ZF_LNC001540 chr3 56258865 56259284 + lincRNA mafga NM_001002045 7733 419 Kaushik et. al. [PMID:24391796]
ZF_LNC001541 chr3 56346475 56348214 - Promoter ern1 NM_001020530 2760 1739 Ulitsky et. al. [PMID:22196729]
ZF_LNC001542 chr3 56347186 56348547 + Promoter ern1 NM_001020530 -3471 1361 Ulitsky et. al. [PMID:22196729]
ZF_LNC001543 chr3 56902276 56962430 + Overlapping rac1b NM_001039818 _ 662 Pauli et. al. [PMID:22110045]
ZF_LNC001544* chr3 57766428 57774032 + lincRNA zgc:165627 NM_001099249 -14664 1566 Ulitsky et. al. [PMID:22196729]
ZF_LNC001545 chr3 57853567 57854144 - lincRNA zgc:165627 NM_001099249 101803 577 Ulitsky et. al. [PMID:22196729]
ZF_LNC001546 chr3 58580511 58582554 + Overlapping syngr2a NM_001080585 _ 1778 Pauli et. al. [PMID:22110045]
ZF_LNC001547 chr3 59293633 59297758 + lincRNA zgc:171489 NM_001122620 26303 3955 Pauli et. al. [PMID:22110045]
ZF_LNC001548 chr3 59662742 59663063 + Promoter si:ch73-281f12.4 NM_001285388 -66 321 Kaushik et. al. [PMID:24391796]
ZF_LNC001549 chr3 60552749 60581857 - Promoter zgc:194562 NM_001130778 -2356 3525 Ulitsky et. al. [PMID:22196729]
ZF_LNC001550 chr3 60638698 60656489 - lincRNA zgc:194562 NM_001130778 22448 4976 Ulitsky et. al. [PMID:22196729]
ZF_LNC001551 chr3 60947710 60947972 + lincRNA sec14l1 NM_201098 2735 262 Kaushik et. al. [PMID:24391796]
ZF_LNC001552 chr3 61575398 61576045 + lincRNA aimp2 NM_213338 -30925 647 Kaushik et. al. [PMID:24391796]
ZF_LNC001553 chr3 62870098 62895504 + Overlapping zgc:113100 NM_001031844 _ 719 Pauli et. al. [PMID:22110045]
ZF_LNC001554 chr3 62966306 62968814 + Intronic zgc:173573 NM_001109862 _ 2158 Pauli et. al. [PMID:22110045]
ZF_LNC001555 chr3 63095257 63145486 + lincRNA sox8b NM_001025465 -29503 388 Ulitsky et. al. [PMID:22196729]